Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_15440 | Not Available | Positive | 3275249 - 3275884 | 21609.2 |
| hypothetical protein | APR48_15445 | Not Available | Positive | 3276041 - 3278992 | 98626.0 |
| hypothetical protein | APR48_15450 | Not Available | Positive | 3279243 - 3286379 | 248422.0 |
| hypothetical protein | APR48_15455 | Not Available | Positive | 3286917 - 3290444 | 120263.0 |
| 6-phosphogluconate dehydrogenase | APR48_15460 | Not Available | Negative | 3290484 - 3291911 | 51793.3 |
| hypothetical protein | APR48_15470 | Not Available | Negative | 3292727 - 3292935 | 7021.27 |
| peptidoglycan-binding protein | APR48_15475 | Not Available | Positive | 3293500 - 3294390 | 29963.7 |
| aldehyde-activating protein | APR48_15480 | Not Available | Negative | 3294453 - 3294857 | 14781.5 |
| dna-binding transcriptional regulator | APR48_15485 | Not Available | Positive | 3294953 - 3295915 | 35428.6 |
| luxr family transcriptional regulator | APR48_15490 | Not Available | Positive | 3296015 - 3296767 | 26656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
