Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_15390 | Not Available | Negative | 3263067 - 3263705 | 24687.7 |
| polyketide cyclase | APR48_15395 | Not Available | Negative | 3263702 - 3264778 | 40038.3 |
| methyltransferase type 11 | APR48_15400 | Not Available | Negative | 3264819 - 3265751 | 34735.5 |
| thiol-disulfide oxidoreductase | APR48_15405 | Not Available | Negative | 3265788 - 3266219 | 15047.4 |
| marr family transcriptional regulator | APR48_15410 | Not Available | Negative | 3266283 - 3266870 | 22121.5 |
| radical sam protein | APR48_15415 | Not Available | Positive | 3266993 - 3268090 | 40924.9 |
| rnd transporter | APR48_15420 | Not Available | Negative | 3268041 - 3269534 | 52386.1 |
| rnd transporter mfp subunit | APR48_15425 | Not Available | Negative | 3269537 - 3270820 | 45147.1 |
| rnd transporter | APR48_15430 | Not Available | Negative | 3270940 - 3274143 | 113502.0 |
| gcn5 family acetyltransferase | APR48_15435 | Not Available | Negative | 3274371 - 3274934 | 20642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
