Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular biosynthesis protein | APR48_15340 | Not Available | Positive | 3252983 - 3253354 | 14570.2 |
| hypothetical protein | APR48_15345 | Not Available | Positive | 3253351 - 3254907 | 57935.2 |
| capsular biosynthesis protein | APR48_15350 | Not Available | Positive | 3254911 - 3255627 | 27322.4 |
| mur ligase | APR48_15355 | Not Available | Positive | 3255698 - 3257404 | 64945.6 |
| poly(3-hydroxybutyrate) depolymerase | APR48_15360 | Not Available | Negative | 3257406 - 3258626 | 45697.8 |
| glutathione s-transferase | APR48_15365 | Not Available | Positive | 3258758 - 3259414 | 24106.4 |
| iclr family transcriptional regulator | APR48_15370 | Not Available | Negative | 3259416 - 3260243 | 30134.5 |
| abc transporter substrate-binding protein | APR48_15375 | Not Available | Positive | 3260367 - 3261353 | 34354.7 |
| phthalate 4,5-dioxygenase | APR48_15380 | Not Available | Positive | 3261374 - 3262711 | 51053.4 |
| 4,5-dioxygenase | APR48_15385 | Not Available | Negative | 3262691 - 3263038 | 13037.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
