Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | APR48_15290 | Not Available | Negative | 3242803 - 3243174 | 13344.9 |
| dna-binding protein | APR48_15295 | Not Available | Negative | 3243209 - 3243931 | 26537.2 |
| phospholipase | APR48_15300 | Not Available | Negative | 3243943 - 3245568 | 59523.4 |
| abc transporter substrate-binding protein | APR48_15305 | Not Available | Negative | 3245636 - 3246622 | 34134.8 |
| adenosine deaminase | APR48_15310 | Not Available | Negative | 3246631 - 3247746 | 41419.1 |
| lysr family transcriptional regulator | APR48_15315 | Not Available | Positive | 3247823 - 3248836 | 36603.7 |
| hypothetical protein | APR48_15320 | Not Available | Positive | 3248908 - 3249276 | 12776.3 |
| hypothetical protein | APR48_15325 | Not Available | Positive | 3249432 - 3250055 | 23006.5 |
| hypothetical protein | APR48_15330 | Not Available | Positive | 3250059 - 3251852 | 65990.9 |
| hypothetical protein | APR48_15335 | Not Available | Positive | 3251819 - 3252973 | 43040.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
