Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_15240 | Not Available | Negative | 3230891 - 3231868 | 33768.4 |
| hypothetical protein | APR48_15245 | Not Available | Negative | 3231886 - 3233478 | 57046.1 |
| transcriptional regulator | APR48_15250 | Not Available | Negative | 3234361 - 3235077 | 26867.2 |
| short-chain dehydrogenase | APR48_15255 | Not Available | Positive | 3235292 - 3236077 | 28306.8 |
| aspartate aminotransferase | APR48_15260 | Not Available | Positive | 3236089 - 3237222 | 41633.7 |
| alpha/beta hydrolase | APR48_15265 | Not Available | Positive | 3237236 - 3238117 | 32140.4 |
| allantoate amidohydrolase | APR48_15270 | Not Available | Positive | 3238114 - 3239364 | 43545.0 |
| mfs transporter | APR48_15275 | Not Available | Positive | 3239390 - 3240706 | 47460.2 |
| acyltransferase | APR48_15280 | Not Available | Negative | 3240740 - 3241885 | 42258.4 |
| class d beta-lactamase | APR48_15285 | Not Available | Negative | 3241882 - 3242691 | 29679.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
