Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | APR48_15190 | Not Available | Positive | 3218709 - 3219104 | 14045.8 |
| epimerase | APR48_15195 | Not Available | Positive | 3219151 - 3219822 | 24129.6 |
| alpha/beta hydrolase | APR48_15200 | Not Available | Negative | 3219835 - 3220644 | 28642.4 |
| hypothetical protein | APR48_15205 | Not Available | Negative | 3220694 - 3222976 | 83657.5 |
| o-acetylhomoserine aminocarboxypropyltransferase | APR48_15210 | Not Available | Negative | 3223038 - 3224345 | 46272.2 |
| hypothetical protein | APR48_15215 | Not Available | Positive | 3224492 - 3224941 | 16708.5 |
| abc transporter atp-binding protein | APR48_15220 | Not Available | Negative | 3224969 - 3226453 | 54144.2 |
| strictosidine synthase | APR48_15225 | Not Available | Negative | 3226519 - 3227622 | 38526.4 |
| abc transporter permease | APR48_15230 | Not Available | Negative | 3227622 - 3229748 | 77111.0 |
| abc transporter substrate-binding protein | APR48_15235 | Not Available | Negative | 3229771 - 3230796 | 35754.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
