Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_15140 | Not Available | Negative | 3207486 - 3207890 | 14248.2 |
| metallophosphoesterase | APR48_15145 | Not Available | Negative | 3207963 - 3208769 | 29819.5 |
| hypothetical protein | APR48_15150 | Not Available | Positive | 3208851 - 3209069 | 7845.39 |
| lysr family transcriptional regulator | APR48_15155 | Not Available | Negative | 3209086 - 3210066 | 35903.5 |
| hypothetical protein | APR48_15160 | Not Available | Positive | 3210169 - 3210714 | 19091.0 |
| phosphoenolpyruvate carboxykinase | APR48_15165 | Not Available | Negative | 3210802 - 3212649 | 67174.9 |
| threonine dehydratase | APR48_15170 | Not Available | Negative | 3213071 - 3214279 | 42473.6 |
| atpase | APR48_15175 | Not Available | Positive | 3214387 - 3216711 | 85593.2 |
| hypothetical protein | APR48_15180 | Not Available | Positive | 3217042 - 3218253 | 44247.9 |
| hypothetical protein | APR48_15185 | Not Available | Negative | 3218263 - 3218607 | 12961.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
