Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | APR48_15040 | Not Available | Negative | 3184269 - 3185171 | 32355.2 |
| abc transporter substrate-binding protein | APR48_15045 | Not Available | Negative | 3185177 - 3186370 | 42758.4 |
| hypothetical protein | APR48_15050 | Not Available | Negative | 3186782 - 3187282 | 18476.4 |
| lysr family transcriptional regulator | APR48_15055 | Not Available | Negative | 3187279 - 3188208 | 33767.0 |
| hypothetical protein | APR48_15060 | Not Available | Positive | 3188305 - 3189291 | 35819.2 |
| n-acylglucosamine 2-epimerase | APR48_15065 | Not Available | Positive | 3189347 - 3190582 | 47003.9 |
| glutaminase a | APR48_15070 | Not Available | Negative | 3190789 - 3191730 | 33001.5 |
| multidrug dmt transporter permease | APR48_15075 | Not Available | Negative | 3191744 - 3192646 | 32432.4 |
| transporter | APR48_15080 | Not Available | Negative | 3192734 - 3193222 | 17724.4 |
| flavin reductase | APR48_15085 | Not Available | Negative | 3193237 - 3193746 | 17969.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
