Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_14990 | Not Available | Negative | 3174702 - 3174923 | 8164.76 |
| lysr family transcriptional regulator | APR48_14995 | Not Available | Positive | 3175034 - 3175924 | 31775.9 |
| response regulator receiver protein | APR48_15000 | Not Available | Negative | 3175931 - 3176581 | 23896.2 |
| amino acid abc transporter substrate-binding protein | APR48_15005 | Not Available | Negative | 3176894 - 3178048 | 42338.2 |
| hypothetical protein | APR48_15010 | Not Available | Negative | 3178145 - 3179797 | 60266.4 |
| aaa family atpase | APR48_15015 | Not Available | Negative | 3179794 - 3180612 | 30062.0 |
| acylamide amidohydrolase | APR48_15020 | Not Available | Negative | 3180632 - 3181669 | 38433.8 |
| abc transporter atp-binding protein | APR48_15025 | Not Available | Negative | 3181709 - 3182398 | 25064.7 |
| abc transporter atp-binding protein | APR48_15030 | Not Available | Negative | 3182412 - 3183194 | 28976.2 |
| urea abc transporter permease subunit urtc | APR48_15035 | Not Available | Negative | 3183209 - 3184258 | 37323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
