Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR48_00720 | Not Available | Positive | 154318 - 155244 | 33220.7 |
| porin | APR48_00725 | Not Available | Positive | 155313 - 157787 | 88973.2 |
| hypothetical protein | APR48_00730 | Not Available | Positive | 157887 - 158681 | 27282.5 |
| luxr family transcriptional regulator | APR48_00735 | Not Available | Positive | 158718 - 160169 | 50837.8 |
| hypothetical protein | APR48_00740 | Not Available | Negative | 160174 - 160776 | 21744.4 |
| abc transporter substrate-binding protein | APR48_00745 | Not Available | Positive | 160947 - 161972 | 36743.3 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR48_00750 | Not Available | Positive | 162007 - 163092 | 38507.5 |
| abc transporter permease | APR48_00755 | Not Available | Positive | 163089 - 163940 | 30766.2 |
| abc transporter permease | APR48_00760 | Not Available | Positive | 163937 - 164737 | 27952.7 |
| ribulose phosphate epimerase | APR48_00765 | Not Available | Positive | 164771 - 165595 | 31255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
