Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline hydroxylase | APR48_14890 | Not Available | Negative | 3155891 - 3156601 | 26244.3 |
| hypothetical protein | APR48_14895 | Not Available | Positive | 3156766 - 3157065 | 10598.0 |
| toxin | APR48_14900 | Not Available | Positive | 3157062 - 3157847 | 29574.8 |
| hypothetical protein | APR48_14905 | Not Available | Negative | 3157866 - 3158798 | 34697.7 |
| lysr family transcriptional regulator | APR48_14910 | Not Available | Negative | 3158804 - 3159706 | 32768.5 |
| acyl-coa dehydrogenase | APR48_14915 | Not Available | Positive | 3159883 - 3161082 | 43219.0 |
| coa-transferase | APR48_14920 | Not Available | Positive | 3161234 - 3162466 | 43498.1 |
| lactoylglutathione lyase | APR48_14925 | Not Available | Positive | 3162480 - 3162920 | 15771.7 |
| hypothetical protein | APR48_14930 | Not Available | Negative | 3162917 - 3163372 | 16332.9 |
| lysr family transcriptional regulator | APR48_14935 | Not Available | Negative | 3163428 - 3164390 | 35535.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
