Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetase | APR48_14840 | Not Available | Negative | 3144727 - 3146061 | 47869.6 |
| cyclase | APR48_14845 | Not Available | Negative | 3146075 - 3146881 | 29909.5 |
| abc transporter permease | APR48_14850 | Not Available | Negative | 3146940 - 3147698 | 26459.2 |
| abc transporter permease | APR48_14855 | Not Available | Negative | 3147722 - 3148492 | 26945.0 |
| abc transporter | APR48_14860 | Not Available | Negative | 3148485 - 3149342 | 30802.5 |
| metal abc transporter substrate-binding protein | APR48_14865 | Not Available | Negative | 3149339 - 3150283 | 33314.2 |
| tetr family transcriptional regulator | APR48_14870 | Not Available | Negative | 3150280 - 3151032 | 27337.9 |
| acetoacetyl-coa synthetase | APR48_14875 | Not Available | Positive | 3151133 - 3153127 | 73393.4 |
| hypothetical protein | APR48_14880 | Not Available | Positive | 3153135 - 3153608 | 16636.3 |
| guanylate cyclase | APR48_14885 | Not Available | Negative | 3153735 - 3155702 | 71997.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
