Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR48_14685 | Not Available | Positive | 3107583 - 3109127 | 53406.4 |
| heme biosynthesis protein hemy | APR48_14690 | Not Available | Negative | 3109129 - 3110427 | 47721.1 |
| hypothetical protein | APR48_14695 | Not Available | Negative | 3110444 - 3111544 | 39350.2 |
| uroporphyrinogen iii synthase | APR48_14700 | Not Available | Negative | 3111541 - 3112314 | 26789.9 |
| porphobilinogen deaminase | APR48_14705 | Not Available | Negative | 3112320 - 3113246 | 33294.2 |
| phosphoenolpyruvate carboxylase | APR48_14710 | Not Available | Positive | 3113342 - 3116188 | 105181.0 |
| aldehyde-activating protein | APR48_14715 | Not Available | Positive | 3116200 - 3116604 | 14590.3 |
| transporter | APR48_14720 | Not Available | Positive | 3116808 - 3118028 | 40913.3 |
| lysr family transcriptional regulator | APR48_14725 | Not Available | Negative | 3118044 - 3119009 | 34322.1 |
| gcn5 family acetyltransferase | APR48_14730 | Not Available | Positive | 3119058 - 3119588 | 19354.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
