Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_14635 | Not Available | Negative | 3096362 - 3096919 | 20317.7 |
| septum formation inhibitor maf | APR48_14640 | Not Available | Positive | 3097001 - 3097582 | 20737.0 |
| ribosomal rna small subunit methyltransferase i | APR48_14645 | Not Available | Positive | 3097579 - 3098343 | 27015.7 |
| mfs transporter | APR48_14650 | Not Available | Positive | 3098346 - 3099500 | 38791.0 |
| peptidase s49 | APR48_14655 | Not Available | Negative | 3099514 - 3100557 | 37710.9 |
| 2fe-2s ferredoxin | APR48_14660 | Not Available | Negative | 3100600 - 3100968 | 13416.7 |
| had family hydrolase | APR48_14665 | Not Available | Negative | 3100986 - 3101666 | 24966.8 |
| ribosomal large subunit pseudouridine synthase c | APR48_14670 | Not Available | Negative | 3101663 - 3102724 | 38305.7 |
| ribonuclease e | APR48_14675 | Not Available | Positive | 3103284 - 3106544 | 118959.0 |
| lysr family transcriptional regulator | APR48_14680 | Not Available | Negative | 3106591 - 3107439 | 31124.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
