Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_14480 | Not Available | Negative | 3067916 - 3068470 | 20149.1 |
| peptidase s16 | APR48_14485 | Not Available | Positive | 3068496 - 3069173 | 24943.5 |
| lysine--trna ligase | APR48_14490 | Not Available | Positive | 3069348 - 3070898 | 58140.3 |
| heat-shock protein | APR48_14495 | Not Available | Positive | 3070895 - 3072154 | 45230.0 |
| metal-dependent hydrolase | APR48_14500 | Not Available | Positive | 3072191 - 3072739 | 20938.3 |
| hypothetical protein | APR48_14510 | Not Available | Positive | 3073491 - 3074399 | 33976.8 |
| hypothetical protein | APR48_14515 | Not Available | Negative | 3074400 - 3075215 | 30534.0 |
| hypothetical protein | APR48_14520 | Not Available | Negative | 3075229 - 3075903 | 25632.5 |
| galactosyl transferase gma12/mnn10 family protein | APR48_14525 | Not Available | Negative | 3076029 - 3077378 | 50108.1 |
| beta-hexosaminidase | APR48_14530 | Not Available | Negative | 3077425 - 3078513 | 39528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
