Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | APR48_00670 | Not Available | Positive | 143217 - 144632 | 52482.2 |
| hypothetical protein | APR48_00675 | Not Available | Positive | 144780 - 145283 | 17922.1 |
| histidine kinase | APR48_00680 | Not Available | Positive | 145324 - 146403 | 39998.2 |
| nitrogen regulation protein nr(i) | APR48_00685 | Not Available | Positive | 146428 - 147966 | 55555.7 |
| hypothetical protein | APR48_00690 | Not Available | Negative | 148017 - 148541 | 18532.4 |
| exodeoxyribonuclease iii | APR48_00695 | Not Available | Negative | 148558 - 149343 | 29491.3 |
| rna polymerase subunit sigma | APR48_00700 | Not Available | Positive | 149510 - 150046 | 19863.0 |
| hypothetical protein | APR48_00705 | Not Available | Positive | 150043 - 151038 | 35896.8 |
| ligand-gated channel protein | APR48_00710 | Not Available | Positive | 151161 - 153632 | 89716.1 |
| rna polymerase subunit sigma | APR48_00715 | Not Available | Positive | 153725 - 154237 | 19222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
