Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_14425 | Not Available | Negative | 3052684 - 3053640 | 36541.2 |
| hypothetical protein | APR48_14430 | Not Available | Negative | 3053664 - 3055160 | 55740.9 |
| enoyl-coa hydratase | APR48_14435 | Not Available | Negative | 3055251 - 3056108 | 29913.7 |
| competence protein comec | APR48_14440 | Not Available | Negative | 3056254 - 3058731 | 88669.0 |
| imp dehydrogenase | APR48_14445 | Not Available | Positive | 3058853 - 3062374 | 131291.0 |
| trna pseudouridine synthase a | APR48_14455 | Not Available | Positive | 3063180 - 3063992 | 30071.6 |
| n-(5'-phosphoribosyl)anthranilate isomerase | APR48_14460 | Not Available | Positive | 3063989 - 3064690 | 24117.9 |
| tryptophan synthase subunit beta | APR48_14465 | Not Available | Positive | 3064739 - 3066016 | 45650.3 |
| tryptophan synthase subunit alpha | APR48_14470 | Not Available | Positive | 3066016 - 3066861 | 29444.7 |
| acetyl-coa carboxylase subunit beta | APR48_14475 | Not Available | Positive | 3066966 - 3067838 | 31718.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
