Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_14375 | Not Available | Negative | 3042003 - 3042893 | 33001.9 |
| abc transporter atp-binding protein | APR48_14380 | Not Available | Negative | 3042890 - 3043960 | 38736.8 |
| abc transporter | APR48_14385 | Not Available | Negative | 3043962 - 3045035 | 37803.6 |
| glycerol-3-phosphate dehydrogenase | APR48_14390 | Not Available | Negative | 3045035 - 3046729 | 62223.9 |
| deor family transcriptional regulator | APR48_14395 | Not Available | Positive | 3046887 - 3047672 | 28667.5 |
| glycerol kinase | APR48_14400 | Not Available | Positive | 3047680 - 3049179 | 53703.1 |
| peptide-binding protein | APR48_14405 | Not Available | Negative | 3049195 - 3049650 | 16830.6 |
| hypothetical protein | APR48_14410 | Not Available | Positive | 3049779 - 3050300 | 19144.8 |
| sulfatase | APR48_14415 | Not Available | Positive | 3050458 - 3052098 | 60280.1 |
| hypothetical protein | APR48_14420 | Not Available | Negative | 3052112 - 3052513 | 15005.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
