Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_14105 | Not Available | Negative | 2994349 - 2994627 | 10688.2 |
| hypothetical protein | APR48_14110 | Not Available | Negative | 2994624 - 2994929 | 11283.9 |
| hypothetical protein | APR48_14115 | Not Available | Negative | 2994964 - 2995605 | 23577.4 |
| hypothetical protein | APR48_14120 | Not Available | Negative | 2995589 - 2995882 | 10635.0 |
| hypothetical protein | APR48_14125 | Not Available | Negative | 2995879 - 2996616 | 26698.2 |
| hypothetical protein | APR48_14295 | Not Available | Positive | 3026620 - 3026841 | 7648.13 |
| transglutaminase | APR48_14300 | Not Available | Positive | 3027264 - 3029294 | 73800.6 |
| n-methyl-d-aspartate receptor nmdar2c subunit | APR48_14310 | Not Available | Positive | 3030638 - 3031279 | 24189.6 |
| hypothetical protein | APR48_14315 | Not Available | Negative | 3031296 - 3031787 | 17501.2 |
| beta-ketoacyl synthase | APR48_14320 | Not Available | Negative | 3031784 - 3032872 | 36690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
