Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | APR48_13995 | Not Available | Positive | 2978013 - 2979515 | 52145.8 |
| hemolysin d | APR48_14000 | Not Available | Positive | 2979545 - 2980885 | 46626.4 |
| multidrug resistance protein b | APR48_14005 | Not Available | Positive | 2980940 - 2982505 | 55801.9 |
| lysr family transcriptional regulator | APR48_14010 | Not Available | Positive | 2982586 - 2983479 | 32246.7 |
| cysteine hydrolase | APR48_14015 | Not Available | Negative | 2983464 - 2984084 | 22188.5 |
| hypothetical protein | APR48_14030 | Not Available | Positive | 2985254 - 2986231 | 35335.0 |
| hypothetical protein | APR48_14035 | Not Available | Negative | 2986923 - 2987450 | 19731.0 |
| hypothetical protein | APR48_14040 | Not Available | Negative | 2987447 - 2987893 | 16589.9 |
| hypothetical protein | APR48_14045 | Not Available | Positive | 2987956 - 2988249 | 10813.9 |
| hypothetical protein | APR48_14050 | Not Available | Negative | 2988898 - 2989722 | 29281.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
