Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone oxidoreductase subunit j | APR48_13945 | Not Available | Positive | 2968004 - 2968663 | 23802.8 |
| nadh-quinone oxidoreductase subunit k | APR48_13950 | Not Available | Positive | 2968660 - 2968968 | 11168.3 |
| nadh:ubiquinone oxidoreductase subunit l | APR48_13955 | Not Available | Positive | 2968987 - 2971026 | 75003.8 |
| nadh:ubiquinone oxidoreductase subunit m | APR48_13960 | Not Available | Positive | 2971054 - 2972532 | 53836.4 |
| nadh:ubiquinone oxidoreductase subunit n | APR48_13965 | Not Available | Positive | 2972557 - 2974044 | 52643.2 |
| hypothetical protein | APR48_13970 | Not Available | Positive | 2974072 - 2974374 | 11051.8 |
| adp-ribose pyrophosphatase | APR48_13975 | Not Available | Positive | 2974406 - 2975005 | 21953.9 |
| hypothetical protein | APR48_13980 | Not Available | Positive | 2975014 - 2975481 | 16723.9 |
| abc transporter | APR48_13985 | Not Available | Negative | 2975607 - 2977394 | 63193.6 |
| marr family transcriptional regulator | APR48_13990 | Not Available | Positive | 2977484 - 2978020 | 19865.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
