Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-shock protein hsp20 | APR48_13845 | Not Available | Negative | 2949274 - 2949648 | 13672.3 |
| abc transporter permease | APR48_13850 | Not Available | Positive | 2949770 - 2951050 | 46609.8 |
| aspartate aminotransferase | APR48_13855 | Not Available | Positive | 2951095 - 2952258 | 42151.6 |
| hypothetical protein | APR48_13860 | Not Available | Positive | 2952259 - 2953056 | 27887.6 |
| transporter | APR48_13865 | Not Available | Positive | 2953140 - 2954057 | 31512.5 |
| 30s ribosomal protein s15 | APR48_13870 | Not Available | Positive | 2954148 - 2954414 | 9889.12 |
| polyribonucleotide nucleotidyltransferase | APR48_13875 | Not Available | Positive | 2954621 - 2956966 | 84991.6 |
| nad(p)h-quinone oxidoreductase | APR48_13880 | Not Available | Positive | 2957063 - 2958061 | 34403.7 |
| triosephosphate isomerase | APR48_13885 | Not Available | Positive | 2958075 - 2958836 | 26079.2 |
| preprotein translocase subunit secg | APR48_13890 | Not Available | Positive | 2958874 - 2959278 | 12792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
