Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_13790 | Not Available | Negative | 2935022 - 2936290 | 46175.6 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR48_13795 | Not Available | Negative | 2936349 - 2937452 | 38960.1 |
| uroporphyrin-iii methyltransferase | APR48_13800 | Not Available | Negative | 2937536 - 2938348 | 27690.5 |
| glycosyl transferase | APR48_13805 | Not Available | Negative | 2938345 - 2939250 | 32015.0 |
| nitrate reductase | APR48_13810 | Not Available | Negative | 2939338 - 2942115 | 99761.9 |
| nitrate abc transporter atp-binding protein | APR48_13820 | Not Available | Negative | 2943444 - 2944253 | 29168.7 |
| nitrate abc transporter permease | APR48_13825 | Not Available | Negative | 2944250 - 2945173 | 33110.4 |
| nitrate transporter | APR48_13830 | Not Available | Negative | 2945184 - 2946428 | 45412.7 |
| antitermination regulator | APR48_13835 | Not Available | Negative | 2946779 - 2948071 | 47535.0 |
| trna threonylcarbamoyl adenosine modification protein tsad | APR48_13840 | Not Available | Positive | 2948152 - 2949204 | 36552.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
