Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | APR48_00625 | Not Available | Positive | 132530 - 133195 | 23619.2 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | Positive | 133209 - 133593 | Not Available |
| methyltransferase type 12 | APR48_00630 | Not Available | Positive | 134155 - 135756 | 58514.4 |
| gamma-glutamyltranspeptidase | APR48_00635 | Not Available | Positive | 135813 - 137546 | 61236.3 |
| 16s rrna pseudouridine(516) synthase | APR48_00640 | Not Available | Positive | 137637 - 138368 | 26405.9 |
| hypothetical protein | APR48_00645 | Not Available | Positive | 138459 - 139478 | 36733.1 |
| peptidase a8 | APR48_00650 | Not Available | Positive | 139462 - 140283 | 29701.4 |
| fatty acid hydroxylase | APR48_00655 | Not Available | Positive | 140294 - 141268 | 36966.6 |
| hypothetical protein | APR48_00660 | Not Available | Positive | 141391 - 142272 | 31828.9 |
| damage-inducible protein | APR48_00665 | Not Available | Positive | 142269 - 143069 | 29235.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
