Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | APR48_13640 | Not Available | Negative | 2902624 - 2905410 | 104292.0 |
| hypothetical protein | APR48_13645 | Not Available | Positive | 2905632 - 2905940 | 11269.8 |
| ornithine cyclodeaminase | APR48_13650 | Not Available | Positive | 2906007 - 2906996 | 34739.6 |
| cytochrome c peroxidase | APR48_13655 | Not Available | Positive | 2907034 - 2908479 | 50716.5 |
| cation transporter | APR48_13660 | Not Available | Positive | 2908489 - 2911749 | 117127.0 |
| cation transporter | APR48_13665 | Not Available | Positive | 2911739 - 2912641 | 32393.7 |
| hypothetical protein | APR48_13670 | Not Available | Positive | 2912862 - 2913071 | 7519.08 |
| molybdenum cofactor biosynthesis protein moga | APR48_13675 | Not Available | Negative | 2913076 - 2913666 | 20963.4 |
| ribosome-associated protein | APR48_13680 | Not Available | Negative | 2913663 - 2914319 | 24324.8 |
| peptidase pmba | APR48_13685 | Not Available | Positive | 2914425 - 2915795 | 48289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
