Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_13540 | Not Available | Positive | 2882824 - 2883339 | 18778.2 |
| gamma-glutamyl kinase | APR48_13545 | Not Available | Negative | 2883410 - 2884549 | 40290.6 |
| gtpase obg | APR48_13550 | Not Available | Negative | 2884628 - 2885704 | 38979.9 |
| 50s ribosomal protein l27 | APR48_13555 | Not Available | Negative | 2885776 - 2886036 | 8942.93 |
| 50s ribosomal protein l21 | APR48_13560 | Not Available | Negative | 2886049 - 2886360 | 11295.9 |
| octaprenyl diphosphate synthase | APR48_13565 | Not Available | Positive | 2886545 - 2887537 | 34776.7 |
| Trna-pro | Not Available | Not Available | Positive | 2887582 - 2887658 | Not Available |
| general secretion pathway protein gspe | APR48_13575 | Not Available | Positive | 2887780 - 2889513 | 62622.4 |
| type ii secretion system protein f | APR48_13580 | Not Available | Positive | 2889544 - 2890779 | 45069.3 |
| peptidase a24 | APR48_13585 | Not Available | Positive | 2890779 - 2891744 | 34501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
