Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_13490 | Not Available | Negative | 2873621 - 2873899 | 9856.48 |
| glutamyl-trna reductase | APR48_13495 | Not Available | Positive | 2873993 - 2875264 | 45620.9 |
| peptide chain release factor 1 | APR48_13500 | Not Available | Positive | 2875361 - 2876449 | 40294.5 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | APR48_13505 | Not Available | Positive | 2876446 - 2877297 | 29897.7 |
| glutaredoxin | APR48_13510 | Not Available | Positive | 2877327 - 2877653 | 11836.2 |
| mannose-6-phosphate isomerase | APR48_13515 | Not Available | Positive | 2877667 - 2878179 | 18452.5 |
| hypothetical protein | APR48_13520 | Not Available | Positive | 2878259 - 2879542 | 47365.7 |
| lytic transglycosylase | APR48_13525 | Not Available | Negative | 2879558 - 2880241 | 25311.5 |
| proline--trna ligase | APR48_13530 | Not Available | Negative | 2880238 - 2881983 | 63804.9 |
| rna pyrophosphohydrolase | APR48_13535 | Not Available | Positive | 2882121 - 2882798 | 26444.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
