Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate transporter permease | APR48_13440 | Not Available | Positive | 2863616 - 2864497 | 32929.6 |
| glycerol-3-phosphate transporter | APR48_13445 | Not Available | Positive | 2864561 - 2865409 | 31013.0 |
| glycerol-3-phosphate transporter atp-binding subunit | APR48_13450 | Not Available | Positive | 2865427 - 2866434 | 36978.1 |
| glycerophosphodiester phosphodiesterase | APR48_13455 | Not Available | Positive | 2866442 - 2867182 | 26556.7 |
| mechanosensitive ion channel protein mscs | APR48_13460 | Not Available | Positive | 2867253 - 2869676 | 84941.5 |
| asnc family transcriptional regulator | APR48_13465 | Not Available | Negative | 2869695 - 2870165 | 17408.3 |
| abc transporter substrate-binding protein | APR48_13470 | Not Available | Positive | 2870423 - 2871346 | 31306.7 |
| abc transporter permease | APR48_13475 | Not Available | Positive | 2871423 - 2872319 | 30949.2 |
| abc transporter atp-binding protein | APR48_13480 | Not Available | Positive | 2872319 - 2873113 | 29048.6 |
| gcn5 family acetyltransferase | APR48_13485 | Not Available | Positive | 2873110 - 2873610 | 17645.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
