Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | APR48_13390 | Not Available | Negative | 2850201 - 2851649 | 51986.1 |
| ubiquinone biosynthesis protein ubib | APR48_13395 | Not Available | Negative | 2851725 - 2853290 | 59986.6 |
| hypothetical protein | APR48_13400 | Not Available | Negative | 2853287 - 2853853 | 20528.6 |
| preprotein translocase subunit tim44 | APR48_13405 | Not Available | Negative | 2853905 - 2854921 | 34269.8 |
| ubiquinone biosynthesis methyltransferase ubie | APR48_13410 | Not Available | Negative | 2854953 - 2855684 | 26745.4 |
| hypothetical protein | APR48_13415 | Not Available | Negative | 2855832 - 2856245 | 14672.2 |
| hypothetical protein | APR48_13420 | Not Available | Negative | 2856256 - 2856705 | 16181.4 |
| fad-linked oxidase | APR48_13425 | Not Available | Negative | 2856702 - 2860580 | 142392.0 |
| d-3-phosphoglycerate dehydrogenase | APR48_13430 | Not Available | Negative | 2860710 - 2861942 | 43846.0 |
| glycerol-3-phosphate abc transporter substrate-binding protein | APR48_13435 | Not Available | Positive | 2862174 - 2863487 | 47706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
