Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_00575 | Not Available | Negative | 120083 - 120400 | 11705.1 |
| 30s ribosomal protein s1 | APR48_00580 | Not Available | Negative | 120475 - 122160 | 61739.7 |
| cytidylate kinase | APR48_00585 | Not Available | Negative | 122359 - 124371 | 71457.7 |
| prephenate dehydrogenase | APR48_00590 | Not Available | Negative | 124373 - 125266 | 31270.6 |
| chorismate mutase | APR48_00595 | Not Available | Negative | 125286 - 126407 | 40316.1 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | APR48_00600 | Not Available | Negative | 126427 - 127494 | 38674.1 |
| hypothetical protein | APR48_00605 | Not Available | Negative | 127568 - 128098 | 18924.8 |
| dna gyrase subunit a | APR48_00610 | Not Available | Negative | 128149 - 130794 | 97910.2 |
| hypothetical protein | APR48_00615 | Not Available | Positive | 131020 - 131679 | 23083.5 |
| 3-demethylubiquinone-9 3-methyltransferase | APR48_00620 | Not Available | Positive | 131811 - 132533 | 26335.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
