Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase | APR48_13240 | Not Available | Positive | 2826146 - 2826784 | 23007.4 |
| 6-pyruvoyl tetrahydrobiopterin synthase | APR48_13245 | Not Available | Positive | 2826813 - 2827175 | 13805.6 |
| quinolinate synthetase | APR48_13250 | Not Available | Negative | 2827191 - 2828306 | 39701.5 |
| nicotinate-nucleotide pyrophosphorylase | APR48_13255 | Not Available | Negative | 2828320 - 2829195 | 31082.4 |
| glycerol-3-phosphate dehydrogenase | APR48_13260 | Not Available | Negative | 2829221 - 2830249 | 34887.2 |
| protein-export protein secb | APR48_13265 | Not Available | Negative | 2830279 - 2830743 | 16842.2 |
| glutaredoxin | APR48_13270 | Not Available | Negative | 2830873 - 2831139 | 9697.93 |
| sulfurtransferase | APR48_13275 | Not Available | Negative | 2831160 - 2831567 | 14299.5 |
| phosphoglyceromutase | APR48_13280 | Not Available | Positive | 2831652 - 2832395 | 27684.8 |
| peptidase s41 | APR48_13285 | Not Available | Positive | 2832505 - 2833947 | 52165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
