Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_13190 | Not Available | Positive | 2815228 - 2815860 | 22238.6 |
| indolepyruvate ferredoxin oxidoreductase | APR48_13195 | Not Available | Positive | 2815966 - 2818134 | 77766.8 |
| indolepyruvate oxidoreductase | APR48_13200 | Not Available | Positive | 2818148 - 2819791 | 58295.3 |
| abc transporter substrate-binding protein | APR48_13205 | Not Available | Positive | 2819830 - 2820822 | 34314.3 |
| c4-dicarboxylate abc transporter | APR48_13210 | Not Available | Positive | 2820913 - 2821950 | 37476.8 |
| c4-dicarboxylate abc transporter permease | APR48_13215 | Not Available | Positive | 2821980 - 2822480 | 18845.3 |
| c4-dicarboxylate abc transporter permease | APR48_13220 | Not Available | Positive | 2822477 - 2823778 | 45729.2 |
| 4-hydroxybenzoyl-coa thioesterase | APR48_13225 | Not Available | Positive | 2823802 - 2824218 | 15757.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | APR48_13230 | Not Available | Positive | 2824360 - 2825253 | 31049.6 |
| pantoate--beta-alanine ligase | APR48_13235 | Not Available | Positive | 2825298 - 2826149 | 31269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
