Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | APR48_12940 | Not Available | Negative | 2760116 - 2761717 | 58301.4 |
| fad-dependent oxidoreductase | APR48_12945 | Not Available | Negative | 2761927 - 2763375 | 53179.4 |
| polyketide cyclase | APR48_12950 | Not Available | Negative | 2763384 - 2763785 | 14371.7 |
| gntr family transcriptional regulator | APR48_12955 | Not Available | Positive | 2763935 - 2765473 | 56937.2 |
| atp-dependent rna helicase | APR48_12960 | Not Available | Negative | 2765546 - 2767018 | 53692.1 |
| metalloprotease | APR48_12965 | Not Available | Negative | 2767172 - 2768059 | 31403.8 |
| deoxycytidine triphosphate deaminase | APR48_12970 | Not Available | Negative | 2768195 - 2768761 | 21305.3 |
| guanine deaminase | APR48_12975 | Not Available | Negative | 2768830 - 2770116 | 46677.3 |
| dna-binding protein | APR48_12980 | Not Available | Negative | 2770276 - 2770812 | 19044.0 |
| hypothetical protein | APR48_12985 | Not Available | Negative | 2771077 - 2772186 | 40500.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
