Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_12890 | Not Available | Positive | 2750884 - 2751258 | 13339.9 |
| hypothetical protein | APR48_12895 | Not Available | Positive | 2751242 - 2751448 | 6938.33 |
| hypothetical protein | APR48_12900 | Not Available | Positive | 2751506 - 2752891 | 51403.9 |
| gnat family acetyltransferase | APR48_12905 | Not Available | Negative | 2752896 - 2753357 | 17788.0 |
| cobalamin biosynthesis protein p47k | APR48_12910 | Not Available | Negative | 2753428 - 2754408 | 33794.4 |
| amidohydrolase | APR48_12915 | Not Available | Negative | 2754405 - 2756066 | 60362.6 |
| peptide abc transporter atp-binding protein | APR48_12920 | Not Available | Negative | 2756116 - 2757150 | 37550.7 |
| peptide abc transporter atp-binding protein | APR48_12925 | Not Available | Negative | 2757147 - 2758178 | 37316.0 |
| abc transporter permease | APR48_12930 | Not Available | Negative | 2758180 - 2759100 | 32310.1 |
| abc transporter permease | APR48_12935 | Not Available | Negative | 2759129 - 2760103 | 34766.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
