Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | APR48_12840 | Not Available | Positive | 2740100 - 2741650 | 55912.9 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | APR48_12845 | Not Available | Negative | 2741663 - 2742526 | 31087.2 |
| hypothetical protein | APR48_12850 | Not Available | Positive | 2742550 - 2743866 | 47061.1 |
| serine/threonine protein kinase | APR48_12855 | Not Available | Positive | 2743883 - 2744851 | 34596.2 |
| hypothetical protein | APR48_12860 | Not Available | Positive | 2744891 - 2745868 | 35378.0 |
| adenylosuccinate synthase | APR48_12865 | Not Available | Positive | 2745915 - 2747210 | 46250.1 |
| ubiquinone biosynthesis protein ubie | APR48_12870 | Not Available | Positive | 2747207 - 2747854 | 23299.2 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_12875 | Not Available | Positive | 2747978 - 2748979 | 36638.1 |
| hypothetical protein | APR48_12880 | Not Available | Positive | 2749064 - 2749834 | 27357.2 |
| carbonate dehydratase | APR48_12885 | Not Available | Positive | 2749908 - 2750468 | 19876.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
