Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | APR48_00525 | Not Available | Negative | 109495 - 111207 | 59672.0 |
| cation:proton antiporter | APR48_00530 | Not Available | Negative | 111204 - 111566 | 12891.0 |
| cation:proton antiporter | APR48_00535 | Not Available | Negative | 111566 - 114526 | 106319.0 |
| protein crcb | APR48_00540 | Not Available | Negative | 114606 - 114983 | 12834.2 |
| c4-dicarboxylate abc transporter permease | APR48_00545 | Not Available | Negative | 115015 - 116316 | 45913.3 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_00550 | Not Available | Negative | 116309 - 116818 | 18681.1 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_00555 | Not Available | Negative | 116841 - 117809 | 35290.2 |
| hypothetical protein | APR48_00560 | Not Available | Negative | 118046 - 118372 | 11162.5 |
| hypothetical protein | APR48_00565 | Not Available | Negative | 118504 - 119682 | 43626.4 |
| hypothetical protein | APR48_00570 | Not Available | Negative | 119672 - 120010 | 11926.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
