Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination regulator | APR48_12740 | Not Available | Positive | 2717166 - 2717765 | 21999.3 |
| abc transporter substrate-binding protein | APR48_12745 | Not Available | Positive | 2718025 - 2719272 | 45203.9 |
| urea abc transporter permease subunit urtb | APR48_12750 | Not Available | Positive | 2719349 - 2720242 | 30785.2 |
| urea abc transporter permease subunit urtc | APR48_12755 | Not Available | Positive | 2720248 - 2721363 | 39251.0 |
| abc transporter atp-binding protein | APR48_12760 | Not Available | Positive | 2721360 - 2722130 | 28047.9 |
| abc transporter atp-binding protein | APR48_12765 | Not Available | Positive | 2722124 - 2722816 | 24948.6 |
| amidase | APR48_12770 | Not Available | Positive | 2722872 - 2724413 | 53527.9 |
| phosphonoacetate hydrolase | APR48_12775 | Not Available | Positive | 2724586 - 2725824 | 44103.0 |
| alcohol dehydrogenase | APR48_12780 | Not Available | Positive | 2725835 - 2726932 | 38877.8 |
| phosphonoacetaldehyde dehydrogenase | APR48_12785 | Not Available | Positive | 2726929 - 2728374 | 52903.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
