Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_12640 | Not Available | Positive | 2682997 - 2683398 | 13806.8 |
| hypothetical protein | APR48_12645 | Not Available | Positive | 2683757 - 2684353 | 22825.8 |
| type ii secretion system protein gspg | APR48_12650 | Not Available | Positive | 2684558 - 2685010 | 16398.7 |
| hypothetical protein | APR48_12655 | Not Available | Positive | 2685094 - 2686044 | 34813.1 |
| hypothetical protein | APR48_12660 | Not Available | Positive | 2686046 - 2687251 | 42606.5 |
| hypothetical protein | APR48_12665 | Not Available | Positive | 2687248 - 2687835 | 20669.8 |
| hypothetical protein | APR48_12670 | Not Available | Negative | 2687945 - 2688160 | 6612.91 |
| type ii secretion system protein gspd | APR48_12675 | Not Available | Positive | 2688168 - 2690591 | 84024.0 |
| type ii secretion system protein gspe | APR48_12680 | Not Available | Positive | 2690602 - 2692050 | 52335.0 |
| type ii secretion system protein gspf | APR48_12685 | Not Available | Positive | 2692060 - 2693262 | 43456.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
