Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_12540 | Not Available | Negative | 2664886 - 2665068 | 6077.55 |
| dehydrogenase | APR48_12545 | Not Available | Negative | 2665391 - 2666143 | 27094.5 |
| arac family transcriptional regulator | APR48_12550 | Not Available | Positive | 2666245 - 2667171 | 33332.2 |
| hypothetical protein | APR48_12555 | Not Available | Negative | 2667181 - 2668317 | 39447.6 |
| hypothetical protein | APR48_12560 | Not Available | Negative | 2668321 - 2669319 | 34582.6 |
| prpf protein | APR48_12565 | Not Available | Negative | 2669361 - 2670542 | 40688.1 |
| receptor | APR48_12570 | Not Available | Negative | 2670547 - 2671530 | 34752.9 |
| 3-isopropylmalate dehydratase | APR48_12575 | Not Available | Negative | 2671550 - 2672176 | 22772.2 |
| 3-isopropylmalate dehydratase | APR48_12580 | Not Available | Negative | 2672179 - 2673597 | 49627.1 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR48_12585 | Not Available | Negative | 2673603 - 2674466 | 30354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
