Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_12490 | Not Available | Negative | 2652763 - 2653993 | 42955.9 |
| abc transporter substrate-binding protein | APR48_12495 | Not Available | Negative | 2654026 - 2655039 | 37299.9 |
| acyl-coa synthetase | APR48_12500 | Not Available | Negative | 2655109 - 2656698 | 56910.3 |
| acetyl-coa acetyltransferase | APR48_12505 | Not Available | Negative | 2656695 - 2657867 | 40887.8 |
| 3-oxoacyl-acp reductase | APR48_12510 | Not Available | Negative | 2657882 - 2658700 | 28089.5 |
| dna-binding protein | APR48_12515 | Not Available | Negative | 2658723 - 2659124 | 14270.0 |
| dna-binding protein | APR48_12520 | Not Available | Negative | 2659117 - 2659671 | 19668.9 |
| lysr family transcriptional regulator | APR48_12525 | Not Available | Positive | 2659788 - 2660669 | 32226.5 |
| hypothetical protein | APR48_12530 | Not Available | Positive | 2661025 - 2662953 | 70431.6 |
| hypothetical protein | APR48_12535 | Not Available | Positive | 2663507 - 2664868 | 47920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
