Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_12435 | Not Available | Negative | 2640918 - 2641439 | 18319.2 |
| dna gyrase subunit b | APR48_12440 | Not Available | Negative | 2641773 - 2644394 | 96022.5 |
| dna polymerase iii subunit beta | APR48_12445 | Not Available | Negative | 2644535 - 2645641 | 40283.8 |
| chromosomal replication initiator dnaa | APR48_12450 | Not Available | Negative | 2645763 - 2647142 | 51482.1 |
| 50s ribosomal protein l34 | APR48_12455 | Not Available | Positive | 2647514 - 2647648 | 5110.49 |
| ribonuclease p protein component | APR48_12460 | Not Available | Positive | 2647735 - 2648157 | 15359.6 |
| membrane protein insertion efficiency factor yidd | APR48_12465 | Not Available | Positive | 2648154 - 2648441 | 10575.8 |
| insertase | APR48_12470 | Not Available | Positive | 2648438 - 2650135 | 62363.9 |
| trna modification gtpase trme | APR48_12475 | Not Available | Positive | 2650212 - 2651621 | 49033.9 |
| crp/fnr family transcriptional regulator | APR48_12480 | Not Available | Positive | 2651728 - 2652189 | 16554.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
