Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | APR48_12330 | Not Available | Negative | 2617647 - 2620031 | 86734.4 |
| beta-hexosaminidase | APR48_12335 | Not Available | Negative | 2620045 - 2621361 | 47559.4 |
| hypothetical protein | APR48_12340 | Not Available | Negative | 2621358 - 2622806 | 51969.4 |
| trypsin | APR48_12345 | Not Available | Positive | 2622994 - 2625066 | 75005.8 |
| exosortase | APR48_12350 | Not Available | Positive | 2625083 - 2626018 | 32679.8 |
| hypothetical protein | APR48_12355 | Not Available | Positive | 2626023 - 2626589 | 21279.6 |
| glycosyl transferase | APR48_12360 | Not Available | Positive | 2626598 - 2627875 | 45953.5 |
| gcn5 family acetyltransferase | APR48_12365 | Not Available | Positive | 2627872 - 2628618 | 26749.8 |
| hypothetical protein | APR48_12370 | Not Available | Negative | 2628629 - 2629222 | 20760.1 |
| hypothetical protein | APR48_12380 | Not Available | Positive | 2630931 - 2631494 | 20103.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
