Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_00475 | Not Available | Negative | 101837 - 102625 | 28922.6 |
| dihydrodipicolinate synthetase | APR48_00480 | Not Available | Negative | 102622 - 103683 | 37919.5 |
| hypothetical protein | APR48_00485 | Not Available | Negative | 103701 - 104570 | 30298.6 |
| epimerase | APR48_00490 | Not Available | Negative | 104582 - 105634 | 38224.7 |
| nitrate abc transporter permease | APR48_00495 | Not Available | Negative | 105631 - 106398 | 28005.6 |
| tetr family transcriptional regulator | APR48_00500 | Not Available | Negative | 106548 - 107231 | 24991.9 |
| nitrate abc transporter substrate-binding protein | APR48_00505 | Not Available | Positive | 107337 - 108329 | 35361.3 |
| cation:proton antiporter | APR48_00510 | Not Available | Negative | 108352 - 108735 | 13594.8 |
| cation:proton antiporter | APR48_00515 | Not Available | Negative | 108732 - 109010 | 10059.0 |
| cation:proton antiporter | APR48_00520 | Not Available | Negative | 109007 - 109498 | 18110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
