Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_12230 | Not Available | Negative | 2599849 - 2600034 | 6044.98 |
| glutathione s-transferase | APR48_12235 | Not Available | Positive | 2600212 - 2600820 | 22414.9 |
| 1,2-oxophytodienoate reductase | APR48_12240 | Not Available | Positive | 2601038 - 2602141 | 39244.3 |
| hypothetical protein | APR48_12245 | Not Available | Positive | 2602187 - 2602672 | 17023.7 |
| gcn5 family acetyltransferase | APR48_12250 | Not Available | Positive | 2602669 - 2603151 | 17946.6 |
| hypothetical protein | APR48_12255 | Not Available | Positive | 2603148 - 2603558 | 15145.0 |
| histidine kinase | APR48_12260 | Not Available | Negative | 2603542 - 2604948 | 50754.2 |
| two-component system response regulator | APR48_12265 | Not Available | Negative | 2604962 - 2605651 | 24955.1 |
| esterase | APR48_12270 | Not Available | Positive | 2605789 - 2606661 | 32094.6 |
| phosphopantetheine-binding protein | APR48_12275 | Not Available | Positive | 2606822 - 2607115 | 10443.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
