Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein dinb | APR48_12180 | Not Available | Negative | 2589535 - 2590044 | 18383.6 |
| 2-hydroxy-acid oxidase | APR48_12185 | Not Available | Positive | 2590256 - 2591680 | 50590.6 |
| peptidoglycan-binding protein | APR48_12190 | Not Available | Negative | 2591772 - 2592677 | 30735.6 |
| chromosome partitioning protein parb | APR48_12195 | Not Available | Negative | 2592787 - 2593749 | 34271.1 |
| alpha/beta hydrolase | APR48_12200 | Not Available | Negative | 2593749 - 2594297 | 20270.9 |
| chromosome partitioning protein | APR48_12205 | Not Available | Negative | 2594340 - 2595257 | 32338.1 |
| lysine transporter lyse | APR48_12210 | Not Available | Negative | 2595267 - 2595881 | 21510.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | APR48_12215 | Not Available | Negative | 2596029 - 2596667 | 22821.8 |
| trna uridine 5-carboxymethylaminomethyl modification protein | APR48_12220 | Not Available | Negative | 2596664 - 2598616 | 71440.2 |
| transglutaminase | APR48_12225 | Not Available | Negative | 2598787 - 2599671 | 32153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
