Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APR48_12130 | Not Available | Negative | 2583278 - 2583880 | 22131.8 |
| transcriptional regulator | APR48_12135 | Not Available | Positive | 2584057 - 2585001 | 34727.9 |
| hypothetical protein | APR48_12140 | Not Available | Positive | 2585178 - 2585444 | 9781.65 |
| hypothetical protein | APR48_12145 | Not Available | Negative | 2585531 - 2585938 | 14899.7 |
| deaminase | APR48_12150 | Not Available | Negative | 2586092 - 2586688 | 22033.2 |
| hxlr family transcriptional regulator | APR48_12155 | Not Available | Positive | 2586832 - 2587260 | 15789.2 |
| hypothetical protein | APR48_12160 | Not Available | Positive | 2587351 - 2587767 | 14847.4 |
| gdsl family lipase | APR48_12165 | Not Available | Positive | 2587894 - 2588532 | 22200.7 |
| hypothetical protein | APR48_12170 | Not Available | Negative | 2588546 - 2588908 | 12311.8 |
| cobalamin adenosyltransferase | APR48_12175 | Not Available | Negative | 2588940 - 2589521 | 20894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
