Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_12080 | Not Available | Negative | 2573198 - 2574517 | 47227.0 |
| esterase | APR48_12085 | Not Available | Positive | 2574620 - 2575045 | 15317.2 |
| pyrimidine utilization transport protein g | APR48_12090 | Not Available | Positive | 2575095 - 2576378 | 43712.8 |
| septum site-determining protein minc | APR48_12095 | Not Available | Positive | 2576534 - 2577292 | 26157.5 |
| septum site-determining protein mind | APR48_12100 | Not Available | Positive | 2577357 - 2578172 | 29244.2 |
| cell division topological specificity factor mine | APR48_12105 | Not Available | Positive | 2578176 - 2578454 | 10377.7 |
| rhodanese | APR48_12110 | Not Available | Negative | 2578456 - 2580060 | 57798.9 |
| abc transporter substrate-binding protein | APR48_12115 | Not Available | Negative | 2580063 - 2581043 | 35284.3 |
| fatty acid desaturase | APR48_12120 | Not Available | Positive | 2581180 - 2582148 | 37429.3 |
| lysophospholipase | APR48_12125 | Not Available | Negative | 2582155 - 2583072 | 33176.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
