Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | APR48_11815 | Not Available | Positive | 2518851 - 2519960 | 41513.8 |
| cobalamin biosynthesis protein cbix | APR48_11820 | Not Available | Positive | 2519960 - 2520334 | 13196.0 |
| transcriptional regulator | APR48_11825 | Not Available | Positive | 2520398 - 2521339 | 34976.3 |
| aminotransferase | APR48_11830 | Not Available | Positive | 2521383 - 2522552 | 42419.1 |
| rard protein | APR48_11835 | Not Available | Positive | 2522590 - 2522976 | 13656.3 |
| hypothetical protein | APR48_11840 | Not Available | Positive | 2522993 - 2523460 | 16627.0 |
| atp-dependent helicase | APR48_11845 | Not Available | Negative | 2523821 - 2527684 | 143953.0 |
| peptidase m41 | APR48_11850 | Not Available | Positive | 2528098 - 2530104 | 73910.8 |
| n-acetylglutamate synthase | APR48_11855 | Not Available | Positive | 2530148 - 2531494 | 49414.5 |
| amino acid transporter | APR48_11860 | Not Available | Positive | 2531526 - 2532161 | 22058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
