Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_11765 | Not Available | Positive | 2511265 - 2511690 | 15018.2 |
| stomatin 2 | APR48_11770 | Not Available | Positive | 2511725 - 2512657 | 33780.7 |
| Trna-ser | Not Available | Not Available | Positive | 2512703 - 2512793 | Not Available |
| hypothetical protein | APR48_11780 | Not Available | Positive | 2512933 - 2513295 | 12719.7 |
| hypothetical protein | APR48_11785 | Not Available | Positive | 2513435 - 2513824 | 14235.0 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_11790 | Not Available | Negative | 2513932 - 2515140 | 41788.1 |
| hypothetical protein | APR48_11795 | Not Available | Negative | 2515290 - 2515709 | 14832.6 |
| dna polymerase iii subunit chi | APR48_11800 | Not Available | Negative | 2515709 - 2516152 | 16362.4 |
| aminopeptidase | APR48_11805 | Not Available | Negative | 2516149 - 2517696 | 52885.4 |
| lps export abc transporter permease lptf | APR48_11810 | Not Available | Positive | 2517718 - 2518854 | 41559.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
