Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcystin degradation protein mlrc | APR48_00425 | Not Available | Positive | 90705 - 92180 | 51855.0 |
| polyketide cyclase | APR48_00430 | Not Available | Positive | 92281 - 92658 | 13298.6 |
| histidine kinase | APR48_00435 | Not Available | Negative | 92660 - 93805 | 40760.7 |
| carbon monoxide dehydrogenase | APR48_00440 | Not Available | Positive | 94023 - 94526 | 17387.1 |
| carbon monoxide dehydrogenase | APR48_00445 | Not Available | Positive | 94537 - 96924 | 85213.4 |
| carbon monoxide dehydrogenase | APR48_00450 | Not Available | Positive | 96962 - 97753 | 27435.1 |
| atpase | APR48_00455 | Not Available | Positive | 97939 - 98844 | 33492.2 |
| hypothetical protein | APR48_00460 | Not Available | Positive | 98857 - 100059 | 44181.6 |
| carbon monoxide dehydrogenase | APR48_00465 | Not Available | Positive | 100105 - 100770 | 22472.6 |
| cytochrome oxidase i | APR48_00470 | Not Available | Positive | 100810 - 101826 | 36690.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
